Characterization of Receptor Binding Profiles of Influenza A Viruses Using An Ellipsometry-Based Label-Free Glycan Microarray Assay Platform
Identifieur interne : 000584 ( Main/Exploration ); précédent : 000583; suivant : 000585Characterization of Receptor Binding Profiles of Influenza A Viruses Using An Ellipsometry-Based Label-Free Glycan Microarray Assay Platform
Auteurs : Yiyan Fei ; Yung-Shin Sun [Taïwan] ; Yanhong Li ; Hai Yu ; Kam Lau ; James P. Landry ; Zeng Luo ; Nicole Baumgarth ; Xi Chen ; Xiangdong ZhuSource :
- Biomolecules [ 2218-273X ] ; 2015.
Abstract
A key step leading to influenza viral infection is the highly specific binding of a viral spike protein, hemagglutinin (HA), with an extracellular glycan receptor of a host cell. Detailed and timely characterization of virus-receptor binding profiles may be used to evaluate and track the pandemic potential of an influenza virus strain. We demonstrate a label-free glycan microarray assay platform for acquiring influenza virus binding profiles against a wide variety of glycan receptors. By immobilizing biotinylated receptors on a streptavidin-functionalized solid surface, we measured binding curves of five influenza A virus strains with 24 glycans of diverse structures and used the apparent equilibrium dissociation constants (avidity constants, 10–100 pM) as characterizing parameters of viral receptor profiles. Furthermore by measuring binding kinetic constants of solution-phase glycans to immobilized viruses, we confirmed that the glycan-HA affinity constant is in the range of 10 mM and the reaction is enthalpy-driven.
Url:
DOI: 10.3390/biom5031480
PubMed: 26193329
PubMed Central: 4598760
Affiliations:
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<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Characterization of Receptor Binding Profiles of Influenza A Viruses Using An Ellipsometry-Based Label-Free Glycan Microarray Assay Platform</title><author><name sortKey="Fei, Yiyan" sort="Fei, Yiyan" uniqKey="Fei Y" first="Yiyan" last="Fei">Yiyan Fei</name><affiliation><nlm:aff id="af1-biomolecules-05-01480">Key Laboratory of Micro and Nano Photonic Structures (Ministry of Education), Department of Optical Science and Engineering, Shanghai Engineering Research Center of Ultra-Precision Optical Manufacturing, Fudan University, 220 Handan Road, Shanghai 200433, China; E-Mail:<email>fyy@fudan.edu.cn</email></nlm:aff></affiliation><affiliation><nlm:aff id="af2-biomolecules-05-01480">Department of Physics, University of California, Davis, CA 95616, USA; E-Mails:<email>bacan1125@gmail.com</email> (Y.-S.S.);<email>jim.landry@gmail.com</email> (J.P.L.)</nlm:aff></affiliation></author><author><name sortKey="Sun, Yung Shin" sort="Sun, Yung Shin" uniqKey="Sun Y" first="Yung-Shin" last="Sun">Yung-Shin Sun</name><affiliation><nlm:aff id="af2-biomolecules-05-01480">Department of Physics, University of California, Davis, CA 95616, USA; E-Mails:<email>bacan1125@gmail.com</email> (Y.-S.S.);<email>jim.landry@gmail.com</email> (J.P.L.)</nlm:aff></affiliation><affiliation wicri:level="1"><nlm:aff id="af3-biomolecules-05-01480">Department of Physics, Fu-Jen Catholic University, New Taipei City 24205, Taiwan</nlm:aff><country xml:lang="fr">Taïwan</country><wicri:regionArea>Department of Physics, Fu-Jen Catholic University, New Taipei City 24205</wicri:regionArea><wicri:noRegion>New Taipei City 24205</wicri:noRegion></affiliation></author><author><name sortKey="Li, Yanhong" sort="Li, Yanhong" uniqKey="Li Y" first="Yanhong" last="Li">Yanhong Li</name><affiliation><nlm:aff id="af4-biomolecules-05-01480">Department of Chemistry, University of California, Davis, CA 95616, USA; E-Mails:<email>yhzli@ucdavis.edu</email> (Y.L.);<email>hyu@ucdavis.edu</email> (H.Y.);<email>edlau@ucdavis.edu</email> (K.L.);<email>chen@chem.ucdavis.edu</email> (X.C.)</nlm:aff></affiliation></author><author><name sortKey="Yu, Hai" sort="Yu, Hai" uniqKey="Yu H" first="Hai" last="Yu">Hai Yu</name><affiliation><nlm:aff id="af4-biomolecules-05-01480">Department of Chemistry, University of California, Davis, CA 95616, USA; E-Mails:<email>yhzli@ucdavis.edu</email> (Y.L.);<email>hyu@ucdavis.edu</email> (H.Y.);<email>edlau@ucdavis.edu</email> (K.L.);<email>chen@chem.ucdavis.edu</email> (X.C.)</nlm:aff></affiliation></author><author><name sortKey="Lau, Kam" sort="Lau, Kam" uniqKey="Lau K" first="Kam" last="Lau">Kam Lau</name><affiliation><nlm:aff id="af4-biomolecules-05-01480">Department of Chemistry, University of California, Davis, CA 95616, USA; E-Mails:<email>yhzli@ucdavis.edu</email> (Y.L.);<email>hyu@ucdavis.edu</email> (H.Y.);<email>edlau@ucdavis.edu</email> (K.L.);<email>chen@chem.ucdavis.edu</email> (X.C.)</nlm:aff></affiliation></author><author><name sortKey="Landry, James P" sort="Landry, James P" uniqKey="Landry J" first="James P." last="Landry">James P. Landry</name><affiliation><nlm:aff id="af2-biomolecules-05-01480">Department of Physics, University of California, Davis, CA 95616, USA; E-Mails:<email>bacan1125@gmail.com</email> (Y.-S.S.);<email>jim.landry@gmail.com</email> (J.P.L.)</nlm:aff></affiliation></author><author><name sortKey="Luo, Zeng" sort="Luo, Zeng" uniqKey="Luo Z" first="Zeng" last="Luo">Zeng Luo</name><affiliation><nlm:aff id="af5-biomolecules-05-01480">Center for Comparative Medicine, University of California, Davis, CA 95616, USA; E-Mails:<email>zluo@ucdavis.edu</email> (Z.L.);<email>nbaumgarth@ucdavis.edu</email> (N.B.)</nlm:aff></affiliation></author><author><name sortKey="Baumgarth, Nicole" sort="Baumgarth, Nicole" uniqKey="Baumgarth N" first="Nicole" last="Baumgarth">Nicole Baumgarth</name><affiliation><nlm:aff id="af5-biomolecules-05-01480">Center for Comparative Medicine, University of California, Davis, CA 95616, USA; E-Mails:<email>zluo@ucdavis.edu</email> (Z.L.);<email>nbaumgarth@ucdavis.edu</email> (N.B.)</nlm:aff></affiliation></author><author><name sortKey="Chen, Xi" sort="Chen, Xi" uniqKey="Chen X" first="Xi" last="Chen">Xi Chen</name><affiliation><nlm:aff id="af4-biomolecules-05-01480">Department of Chemistry, University of California, Davis, CA 95616, USA; E-Mails:<email>yhzli@ucdavis.edu</email> (Y.L.);<email>hyu@ucdavis.edu</email> (H.Y.);<email>edlau@ucdavis.edu</email> (K.L.);<email>chen@chem.ucdavis.edu</email> (X.C.)</nlm:aff></affiliation></author><author><name sortKey="Zhu, Xiangdong" sort="Zhu, Xiangdong" uniqKey="Zhu X" first="Xiangdong" last="Zhu">Xiangdong Zhu</name><affiliation><nlm:aff id="af2-biomolecules-05-01480">Department of Physics, University of California, Davis, CA 95616, USA; E-Mails:<email>bacan1125@gmail.com</email> (Y.-S.S.);<email>jim.landry@gmail.com</email> (J.P.L.)</nlm:aff></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">26193329</idno><idno type="pmc">4598760</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4598760</idno><idno type="RBID">PMC:4598760</idno><idno type="doi">10.3390/biom5031480</idno><date when="2015">2015</date><idno type="wicri:Area/Pmc/Corpus">000028</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Corpus" wicri:corpus="PMC">000028</idno><idno type="wicri:Area/Pmc/Curation">000028</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Curation">000028</idno><idno type="wicri:Area/Pmc/Checkpoint">000416</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Checkpoint">000416</idno><idno type="wicri:Area/Ncbi/Merge">000B94</idno><idno type="wicri:Area/Ncbi/Curation">000B94</idno><idno type="wicri:Area/Ncbi/Checkpoint">000B94</idno><idno type="wicri:Area/Main/Merge">000585</idno><idno type="wicri:Area/Main/Curation">000584</idno><idno type="wicri:Area/Main/Exploration">000584</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Characterization of Receptor Binding Profiles of Influenza A Viruses Using An Ellipsometry-Based Label-Free Glycan Microarray Assay Platform</title><author><name sortKey="Fei, Yiyan" sort="Fei, Yiyan" uniqKey="Fei Y" first="Yiyan" last="Fei">Yiyan Fei</name><affiliation><nlm:aff id="af1-biomolecules-05-01480">Key Laboratory of Micro and Nano Photonic Structures (Ministry of Education), Department of Optical Science and Engineering, Shanghai Engineering Research Center of Ultra-Precision Optical Manufacturing, Fudan University, 220 Handan Road, Shanghai 200433, China; E-Mail:<email>fyy@fudan.edu.cn</email></nlm:aff></affiliation><affiliation><nlm:aff id="af2-biomolecules-05-01480">Department of Physics, University of California, Davis, CA 95616, USA; E-Mails:<email>bacan1125@gmail.com</email> (Y.-S.S.);<email>jim.landry@gmail.com</email> (J.P.L.)</nlm:aff></affiliation></author><author><name sortKey="Sun, Yung Shin" sort="Sun, Yung Shin" uniqKey="Sun Y" first="Yung-Shin" last="Sun">Yung-Shin Sun</name><affiliation><nlm:aff id="af2-biomolecules-05-01480">Department of Physics, University of California, Davis, CA 95616, USA; E-Mails:<email>bacan1125@gmail.com</email> (Y.-S.S.);<email>jim.landry@gmail.com</email> (J.P.L.)</nlm:aff></affiliation><affiliation wicri:level="1"><nlm:aff id="af3-biomolecules-05-01480">Department of Physics, Fu-Jen Catholic University, New Taipei City 24205, Taiwan</nlm:aff><country xml:lang="fr">Taïwan</country><wicri:regionArea>Department of Physics, Fu-Jen Catholic University, New Taipei City 24205</wicri:regionArea><wicri:noRegion>New Taipei City 24205</wicri:noRegion></affiliation></author><author><name sortKey="Li, Yanhong" sort="Li, Yanhong" uniqKey="Li Y" first="Yanhong" last="Li">Yanhong Li</name><affiliation><nlm:aff id="af4-biomolecules-05-01480">Department of Chemistry, University of California, Davis, CA 95616, USA; E-Mails:<email>yhzli@ucdavis.edu</email> (Y.L.);<email>hyu@ucdavis.edu</email> (H.Y.);<email>edlau@ucdavis.edu</email> (K.L.);<email>chen@chem.ucdavis.edu</email> (X.C.)</nlm:aff></affiliation></author><author><name sortKey="Yu, Hai" sort="Yu, Hai" uniqKey="Yu H" first="Hai" last="Yu">Hai Yu</name><affiliation><nlm:aff id="af4-biomolecules-05-01480">Department of Chemistry, University of California, Davis, CA 95616, USA; E-Mails:<email>yhzli@ucdavis.edu</email> (Y.L.);<email>hyu@ucdavis.edu</email> (H.Y.);<email>edlau@ucdavis.edu</email> (K.L.);<email>chen@chem.ucdavis.edu</email> (X.C.)</nlm:aff></affiliation></author><author><name sortKey="Lau, Kam" sort="Lau, Kam" uniqKey="Lau K" first="Kam" last="Lau">Kam Lau</name><affiliation><nlm:aff id="af4-biomolecules-05-01480">Department of Chemistry, University of California, Davis, CA 95616, USA; E-Mails:<email>yhzli@ucdavis.edu</email> (Y.L.);<email>hyu@ucdavis.edu</email> (H.Y.);<email>edlau@ucdavis.edu</email> (K.L.);<email>chen@chem.ucdavis.edu</email> (X.C.)</nlm:aff></affiliation></author><author><name sortKey="Landry, James P" sort="Landry, James P" uniqKey="Landry J" first="James P." last="Landry">James P. Landry</name><affiliation><nlm:aff id="af2-biomolecules-05-01480">Department of Physics, University of California, Davis, CA 95616, USA; E-Mails:<email>bacan1125@gmail.com</email> (Y.-S.S.);<email>jim.landry@gmail.com</email> (J.P.L.)</nlm:aff></affiliation></author><author><name sortKey="Luo, Zeng" sort="Luo, Zeng" uniqKey="Luo Z" first="Zeng" last="Luo">Zeng Luo</name><affiliation><nlm:aff id="af5-biomolecules-05-01480">Center for Comparative Medicine, University of California, Davis, CA 95616, USA; E-Mails:<email>zluo@ucdavis.edu</email> (Z.L.);<email>nbaumgarth@ucdavis.edu</email> (N.B.)</nlm:aff></affiliation></author><author><name sortKey="Baumgarth, Nicole" sort="Baumgarth, Nicole" uniqKey="Baumgarth N" first="Nicole" last="Baumgarth">Nicole Baumgarth</name><affiliation><nlm:aff id="af5-biomolecules-05-01480">Center for Comparative Medicine, University of California, Davis, CA 95616, USA; E-Mails:<email>zluo@ucdavis.edu</email> (Z.L.);<email>nbaumgarth@ucdavis.edu</email> (N.B.)</nlm:aff></affiliation></author><author><name sortKey="Chen, Xi" sort="Chen, Xi" uniqKey="Chen X" first="Xi" last="Chen">Xi Chen</name><affiliation><nlm:aff id="af4-biomolecules-05-01480">Department of Chemistry, University of California, Davis, CA 95616, USA; E-Mails:<email>yhzli@ucdavis.edu</email> (Y.L.);<email>hyu@ucdavis.edu</email> (H.Y.);<email>edlau@ucdavis.edu</email> (K.L.);<email>chen@chem.ucdavis.edu</email> (X.C.)</nlm:aff></affiliation></author><author><name sortKey="Zhu, Xiangdong" sort="Zhu, Xiangdong" uniqKey="Zhu X" first="Xiangdong" last="Zhu">Xiangdong Zhu</name><affiliation><nlm:aff id="af2-biomolecules-05-01480">Department of Physics, University of California, Davis, CA 95616, USA; E-Mails:<email>bacan1125@gmail.com</email> (Y.-S.S.);<email>jim.landry@gmail.com</email> (J.P.L.)</nlm:aff></affiliation></author></analytic><series><title level="j">Biomolecules</title><idno type="eISSN">2218-273X</idno><imprint><date when="2015">2015</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>A key step leading to influenza viral infection is the highly specific binding of a viral spike protein, hemagglutinin (HA), with an extracellular glycan receptor of a host cell. Detailed and timely characterization of virus-receptor binding profiles may be used to evaluate and track the pandemic potential of an influenza virus strain. We demonstrate a label-free glycan microarray assay platform for acquiring influenza virus binding profiles against a wide variety of glycan receptors. By immobilizing biotinylated receptors on a streptavidin-functionalized solid surface, we measured binding curves of five influenza A virus strains with 24 glycans of diverse structures and used the apparent equilibrium dissociation constants (avidity constants, 10–100 pM) as characterizing parameters of viral receptor profiles. Furthermore by measuring binding kinetic constants of solution-phase glycans to immobilized viruses, we confirmed that the glycan-HA affinity constant is in the range of 10 mM and the reaction is enthalpy-driven.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Horimoto, T" uniqKey="Horimoto T">T. 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Ito</name></author><author><name sortKey="Kawaoka, Y" uniqKey="Kawaoka Y">Y. Kawaoka</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Xu, R" uniqKey="Xu R">R. Xu</name></author><author><name sortKey="De Vries, R P" uniqKey="De Vries R">R.P. de Vries</name></author><author><name sortKey="Zhu, X" uniqKey="Zhu X">X. Zhu</name></author><author><name sortKey="Nycholat, C M" uniqKey="Nycholat C">C.M. Nycholat</name></author><author><name sortKey="Mcbride, R" uniqKey="Mcbride R">R. McBride</name></author><author><name sortKey="Yu, W" uniqKey="Yu W">W. Yu</name></author><author><name sortKey="Paulson, J C" uniqKey="Paulson J">J.C. Paulson</name></author><author><name sortKey="Wilson, I A" uniqKey="Wilson I">I.A. Wilson</name></author></analytic></biblStruct></listBibl></div1></back></TEI><affiliations><list><country><li>Taïwan</li></country></list><tree><noCountry><name sortKey="Baumgarth, Nicole" sort="Baumgarth, Nicole" uniqKey="Baumgarth N" first="Nicole" last="Baumgarth">Nicole Baumgarth</name><name sortKey="Chen, Xi" sort="Chen, Xi" uniqKey="Chen X" first="Xi" last="Chen">Xi Chen</name><name sortKey="Fei, Yiyan" sort="Fei, Yiyan" uniqKey="Fei Y" first="Yiyan" last="Fei">Yiyan Fei</name><name sortKey="Landry, James P" sort="Landry, James P" uniqKey="Landry J" first="James P." last="Landry">James P. Landry</name><name sortKey="Lau, Kam" sort="Lau, Kam" uniqKey="Lau K" first="Kam" last="Lau">Kam Lau</name><name sortKey="Li, Yanhong" sort="Li, Yanhong" uniqKey="Li Y" first="Yanhong" last="Li">Yanhong Li</name><name sortKey="Luo, Zeng" sort="Luo, Zeng" uniqKey="Luo Z" first="Zeng" last="Luo">Zeng Luo</name><name sortKey="Yu, Hai" sort="Yu, Hai" uniqKey="Yu H" first="Hai" last="Yu">Hai Yu</name><name sortKey="Zhu, Xiangdong" sort="Zhu, Xiangdong" uniqKey="Zhu X" first="Xiangdong" last="Zhu">Xiangdong Zhu</name></noCountry><country name="Taïwan"><noRegion><name sortKey="Sun, Yung Shin" sort="Sun, Yung Shin" uniqKey="Sun Y" first="Yung-Shin" last="Sun">Yung-Shin Sun</name></noRegion></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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